Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934269.1_cds_XP_016480390.1_71836
CDS Infomation

[gene=LOC107801557] [db_xref=GeneID:107801557] [protein=aldehyde dehydrogenase family 3 member F1-like] [protein_id=XP_016480390.1] [location=complement(join(2804..3064,3174..3323,3482..3572,3644..3816,3948..4052,4320..4444,4627..4833,5035..5131,16559..16627,17682..17870))] [gbkey=CDS]
Sequence

ATGGATAGAGTCGAAGAAATGTTGGGTGAAGTGAGAACAACATTCAGAGGAGGAAGAACA
AGAGGGGTTGAATGGAGGAAAGCACAGCTTCAAGCCCTTCTCAACCTCCTTGCTGAAAAT
GAAGATAAAATCTTTGAAGCACTTAGACAGGATCTTGGAAAGCACCCTGTTGAAGCTTAT
CGTGATGAAGTTGGGGTGGTGAAAAAATCAGCTACCAATGCTTTCCGCTGTGTTGAGAAG
TGGATGGCCCCTCAAAAGGGCCGGATACCATTAGTTTTCTTTCCTGCAAGAGGGGCAGTA
GTATCAGAGCCACTGGGAGTGGTGCTCATATTTGCATCCTGGAATTTTCCCATCTCCCTA
GCTTTAGACCCAGTGATTGGAGCAATTTCGGCTGGAAACACAGTTGTCCTCAAACCTTCA
GACTTAGCACCAAAATGCTCCTCTTTTCTAGCCAATACAATACCTCTTTACTTGGATCCA
GAAGCTATTAAAGTTGTCGAAGGTGGAAAAGACATATCAGAACAGCTATTGCAGCTAAAA
TGGGATAAGATATTTTTTACAGGTGGTCCACAAGTTGCACGCCTCATAATGTCAGCAGCT
GCGAAGCACTTAACACCTGTAACTCTAGAACTGGGTGGAAAATGTCCGACCATCCTTGAC
ACTCTATCAAATTCCTCCGATTTACAGGTGGCTGTCAAAAGGATAGCGGGTGGCAAGTGG
GGACCATGCAACGGACAAGCATGCATAGGAATCGATTATGTGCTCGTGGAAACACAATTT
GCTTCAGTTCTGATCAAACTATTGAAGAAGTTCATCAAGAGATTTTATGGTGAGAACCTG
AAAACTTTGGAAAATCTCGCCAGAATCGTGAACAAGCACCACTTTAAAAGAGTTCACAAC
CTTCTGAAAGATCCGAATGTTGCAGCATCTGTTGTTTATGGAGGCTCAGTAGATGAGGAA
AATATGGTTATTGAGCCAACAATCTTGTTGAATCCTCCCCTAGATGCTGAGATCATGATT
GAAGAAATATTTGGCCCATTGCTTCCAATCATCACACTGAATAATATTGAAGAAAGCATT
CAGTTCATAAACTCGAGGCCAAAACCTCTTGCAATATATGCATTTACCAAGAACGATTCG
TTGAAGGAGAAGATCTTGCAGGAAACATCTTCTGGAAGTCTGACTTTCAATGATGCTATG
GTTCAGTTTTTAGCTGACACATTACCATTCGGAGGCGTTGGTCAGAGTGGTTTCGGACGT
TACCATGGGAAGTTCTCTTTTGACACATTCAGTCATGAAAAAGCAGTCTTACATAGGAGC
TTCTTAATTGAGTTGGAACCAAGGTATCCTCCTTGGAATGATTTCAAAATGGACTTTGTC
AGATTGGCTTACGATTTTGACTATGTTGGTCTTGTACTGCTCTTGCTGGGGTTGAGAGGA
TTATTCAGAAGAAATCGAAGGCAGTAG

Peptide Sequence

PEP ID

XP_016480390.1
PEP Infomation

PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Nicotiana tabacum]
Sequence

MDRVEEMLGEVRTTFRGGRTRGVEWRKAQLQALLNLLAENEDKIFEALRQDLGKHPVEAY
RDEVGVVKKSATNAFRCVEKWMAPQKGRIPLVFFPARGAVVSEPLGVVLIFASWNFPISL
ALDPVIGAISAGNTVVLKPSDLAPKCSSFLANTIPLYLDPEAIKVVEGGKDISEQLLQLK
WDKIFFTGGPQVARLIMSAAAKHLTPVTLELGGKCPTILDTLSNSSDLQVAVKRIAGGKW
GPCNGQACIGIDYVLVETQFASVLIKLLKKFIKRFYGENLKTLENLARIVNKHHFKRVHN
LLKDPNVAASVVYGGSVDEENMVIEPTILLNPPLDAEIMIEEIFGPLLPIITLNNIEESI
QFINSRPKPLAIYAFTKNDSLKEKILQETSSGSLTFNDAMVQFLADTLPFGGVGQSGFGR
YHGKFSFDTFSHEKAVLHRSFLIELEPRYPPWNDFKMDFVRLAYDFDYVGLVLLLLGLRG
LFRRNRRQ

Transcript Sequence

Gene sequence data has not been registered.